{"id":1187,"date":"2015-02-05T11:14:51","date_gmt":"2015-02-05T11:14:51","guid":{"rendered":"http:\/\/nextmovesoftware.com\/blog\/?p=1187"},"modified":"2015-06-22T16:35:24","modified_gmt":"2015-06-22T15:35:24","slug":"paper-on-reaction-fingerprints-now-out","status":"publish","type":"post","link":"https:\/\/nextmovesoftware.com\/blog\/2015\/02\/05\/paper-on-reaction-fingerprints-now-out\/","title":{"rendered":"Paper on Reaction Fingerprints now out"},"content":{"rendered":"<p>Congrats to our collaborators Nadine and Greg at Novartis who have just published a paper on using reaction fingerprints to classify and measure similarity of reactions:<\/p>\n<blockquote><p><b><a href=\"http:\/\/pubs.acs.org\/doi\/abs\/10.1021\/ci5006614\">Development of a Novel Fingerprint for Chemical Reactions and Its Application to Large-Scale Reaction Classification and Similarity<\/a><\/b><br \/>\nNadine Schneider, Daniel M. Lowe, Roger A. Sayle, and Gregory A. Landrum<br \/>\n<i>J. Chem. Inf. Model<\/i> <b>2015<\/b>, <i>55<\/i>, 39<\/p><\/blockquote>\n<p>Two of the names on the author list are our very own Daniel and Roger, who provided the initial dataset used as a basis for training the reaction fingerprints, and developed the <a href=\"http:\/\/nextmovesoftware.com\/hazelnut\">NameRxn software<\/a> which names and classifies reactions according the RSC&#8217;s <a href=\"http:\/\/www.rsc.org\/ontologies\/RXNO\/\">Reaction Name Ontology<\/a>.<\/p>\n<p>I think this paper is the first to cite a <a href=\"http:\/\/nextmovesoftware.com\/blog\/2014\/02\/27\/unleashing-over-a-million-reactions-into-the-wild\">blog post<\/a> from this blog, and so of course it deserves a special mention&#8230;:-)<\/p>\n<p>And just a note on the reaction below which is taken from Figure 4 in the paper; this is now classified more specifically as an Iodo N-methylation by NameRxn rather than an Iodo N-alkylation:<br \/>\n<a href=\"http:\/\/nextmovesoftware.com\/blog\/wp-content\/uploads\/2015\/01\/Figure4.png\"><img loading=\"lazy\" decoding=\"async\" src=\"\/blog\/wp-content\/uploads\/2015\/01\/Figure4-1024x244.png\" alt=\"Figure4\" width=\"640\" height=\"153\" class=\"aligncenter size-large wp-image-1193\" srcset=\"https:\/\/nextmovesoftware.com\/blog\/wp-content\/uploads\/2015\/01\/Figure4-1024x244.png 1024w, https:\/\/nextmovesoftware.com\/blog\/wp-content\/uploads\/2015\/01\/Figure4-300x71.png 300w, https:\/\/nextmovesoftware.com\/blog\/wp-content\/uploads\/2015\/01\/Figure4.png 1597w\" sizes=\"(max-width: 640px) 100vw, 640px\" \/><\/a><br \/>\n&#8230;and rumours of Roger&#8217;s move to Novartis have been <a href=\"http:\/\/pubs.acs.org\/doi\/abs\/10.1021\/acs.jcim.5b00046\">greatly exaggerated<\/a>. \ud83d\ude42<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Congrats to our collaborators Nadine and Greg at Novartis who have just published a paper on using reaction fingerprints to classify and measure similarity of reactions: Development of a Novel Fingerprint for Chemical Reactions and Its Application to Large-Scale Reaction Classification and Similarity Nadine Schneider, Daniel M. Lowe, Roger A. Sayle, and Gregory A. Landrum &hellip; <a href=\"https:\/\/nextmovesoftware.com\/blog\/2015\/02\/05\/paper-on-reaction-fingerprints-now-out\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Paper on Reaction Fingerprints now out<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"_links":{"self":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/1187"}],"collection":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/comments?post=1187"}],"version-history":[{"count":18,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/1187\/revisions"}],"predecessor-version":[{"id":1422,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/1187\/revisions\/1422"}],"wp:attachment":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/media?parent=1187"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/categories?post=1187"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/tags?post=1187"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}