{"id":470,"date":"2013-04-22T10:39:32","date_gmt":"2013-04-22T09:39:32","guid":{"rendered":"http:\/\/nextmovesoftware.com\/blog\/?p=470"},"modified":"2015-06-22T16:59:48","modified_gmt":"2015-06-22T15:59:48","slug":"pharmas-favourite-reactions","status":"publish","type":"post","link":"https:\/\/nextmovesoftware.com\/blog\/2013\/04\/22\/pharmas-favourite-reactions\/","title":{"rendered":"Pharma&#8217;s favourite reactions"},"content":{"rendered":"<p>Derek Lowe of <a href=\"http:\/\/pipeline.corante.com\/\">In the Pipeline<\/a> has <a href=\"http:\/\/www.rsc.org\/chemistryworld\/Issues\/2009\/October\/ColumnInpipeline.asp\">previously commented<\/a> on the fact that relying on the same old reliable chemical transformations may restrict medicinal chemists to particular regions of chemical space. In order to reach beyond these, it is necessary to use reactions that are &#8220;often not so general and reliable&#8221;.<\/p>\n<p>As part of a poster presentation at the recent Bio-IT World meeting in Boston, Roger has analysed the Electronic Lab Notebook of a major pharmaceutical company using our <a href=\"http:\/\/nextmovesoftware.com\/products\/HazELNut.html\">NameRXN<\/a> software to extract the major classes of reaction as well as the specific top five transformations:<a href=\"http:\/\/nextmovesoftware.com\/blog\/wp-content\/uploads\/2013\/04\/NameRxn.png\"><img loading=\"lazy\" decoding=\"async\" src=\"\/\/nextmovesoftware.com\/blog\/wp-content\/uploads\/2013\/04\/NameRxn.png\" alt=\"NameRXN\" width=\"588\" height=\"630\" class=\"aligncenter size-full wp-image-471\" srcset=\"https:\/\/nextmovesoftware.com\/blog\/wp-content\/uploads\/2013\/04\/NameRxn.png 588w, https:\/\/nextmovesoftware.com\/blog\/wp-content\/uploads\/2013\/04\/NameRxn-280x300.png 280w\" sizes=\"(max-width: 588px) 100vw, 588px\" \/><\/a><br \/>\n<i>Update 2013\/04\/22: See Derek Lowe&#8217;s analysis of these results over at <a href=\"http:\/\/pipeline.corante.com\/archives\/2013\/04\/22\/real_reactions_from_real_lab_notebooks.php\">In the Pipeline<\/a>.<\/i><\/p>\n<p>The full poster explains how the data was extracted from the PKI\/CambridgeSoft ELN using <a href=\"http:\/\/nextmovesoftware.com\/products\/HazELNut.html\">HazELNut<\/a>, and also shows how data quality issues in the reaction entry may be flagged up by combining the NameRXN information with atom-mapping algorithms (<a href=\"http:\/\/nextmovesoftware.com\/products\/HazELNutPoster.pdf\">PDF version<\/a>):<\/p>\n<p><iframe loading=\"lazy\" src=\"\/\/www.slideshare.net\/slideshow\/embed_code\/19159090\" width=\"574\" height=\"613\" frameborder=\"0\" marginwidth=\"0\" marginheight=\"0\" scrolling=\"no\" style=\"border:1px solid #CCC;border-width:1px 1px 0;margin-bottom:5px\" allowfullscreen webkitallowfullscreen mozallowfullscreen> <\/iframe> <\/p>\n<div style=\"margin-bottom:5px\"> <strong> <a href=\"http:\/\/www.slideshare.net\/NextMoveSoftware\/haz-el-nutposter\" title=\"Extraction, analysis, atom mapping, classification and naming of reactions from pharmaceutical ELNs\" target=\"_blank\">Extraction, analysis, atom mapping, classification and naming of reactions from pharmaceutical ELNs<\/a> <\/strong> from <strong><a href=\"http:\/\/www.slideshare.net\/NextMoveSoftware\" target=\"_blank\">NextMove Software<\/a><\/strong> <\/div>\n","protected":false},"excerpt":{"rendered":"<p>Derek Lowe of In the Pipeline has previously commented on the fact that relying on the same old reliable chemical transformations may restrict medicinal chemists to particular regions of chemical space. In order to reach beyond these, it is necessary to use reactions that are &#8220;often not so general and reliable&#8221;. As part of a &hellip; <a href=\"https:\/\/nextmovesoftware.com\/blog\/2013\/04\/22\/pharmas-favourite-reactions\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Pharma&#8217;s favourite reactions<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"_links":{"self":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/470"}],"collection":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/comments?post=470"}],"version-history":[{"count":18,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/470\/revisions"}],"predecessor-version":[{"id":1457,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/470\/revisions\/1457"}],"wp:attachment":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/media?parent=470"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/categories?post=470"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/tags?post=470"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}