{"id":903,"date":"2014-05-12T14:10:09","date_gmt":"2014-05-12T13:10:09","guid":{"rendered":"http:\/\/nextmovesoftware.com\/blog\/?p=903"},"modified":"2015-06-22T15:49:00","modified_gmt":"2015-06-22T14:49:00","slug":"peptide-informatics-at-bio-it-world","status":"publish","type":"post","link":"https:\/\/nextmovesoftware.com\/blog\/2014\/05\/12\/peptide-informatics-at-bio-it-world\/","title":{"rendered":"Peptide informatics at Bio-IT World"},"content":{"rendered":"<p>Congratulations to the Pistoia Alliance for winning this year&#8217;s <a href=\"http:\/\/www.prweb.com\/releases\/2014\/05\/prweb11808789.htm\">Bio-IT World Best Practices Award for Informatics<\/a> for the development of HELM, the Hierarchical Editing Language for Macromolecules. As NextMove&#8217;s <a href=\"http:\/\/nextmovesoftware.com\/sugarnsplice\">Sugar &#038; Splice<\/a> was cited in the submission as supporting HELM, we can claim a small part in helping them achieve this recognition.<\/p>\n<p>Handling and interconverting peptide representations was also the topic of Lisa Sach-Peltason&#8217;s talk, &#8220;<a href=\"..\/news\/LisaSach-Peltason_PeptideInformatics_BioIT_April2014.pdf\">Peptide Informatics &#8211; Bridging the gap between small-molecule and large-molecule systems<\/a>&#8220;. She described the peptide registration system that Roche have developed, in which Sugar &#038; Splice has played a major role. One of the many challenges is that although non-standard amino acids make up 7% by frequency of amino acids used by Roche, over 88% of their peptides contain at least one non-standard amino acid.<br \/>\n<center><iframe loading=\"lazy\" src=\"https:\/\/www.slideshare.net\/slideshow\/embed_code\/34474797?rel=0\" width=\"512\" height=\"421\" frameborder=\"0\" marginwidth=\"0\" marginheight=\"0\" scrolling=\"no\" style=\"border:1px solid #CCC; border-width:1px 1px 0; margin-bottom:5px; max-width: 100%;\" allowfullscreen> <\/iframe> <\/center><br \/>\nAnd finally Roger presented a poster around the same topic, on the challenges of handling peptide line notations for biologics registration and patent filings:<br \/>\n<center><iframe loading=\"lazy\" src=\"https:\/\/www.slideshare.net\/slideshow\/embed_code\/34444441?rel=0\" width=\"574\" height=\"613\" frameborder=\"0\" marginwidth=\"0\" marginheight=\"0\" scrolling=\"no\" style=\"border:1px solid #CCC; border-width:1px 1px 0; margin-bottom:5px; max-width: 100%;\" allowfullscreen> <\/iframe><\/center><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Congratulations to the Pistoia Alliance for winning this year&#8217;s Bio-IT World Best Practices Award for Informatics for the development of HELM, the Hierarchical Editing Language for Macromolecules. As NextMove&#8217;s Sugar &#038; Splice was cited in the submission as supporting HELM, we can claim a small part in helping them achieve this recognition. Handling and interconverting &hellip; <a href=\"https:\/\/nextmovesoftware.com\/blog\/2014\/05\/12\/peptide-informatics-at-bio-it-world\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Peptide informatics at Bio-IT World<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"_links":{"self":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/903"}],"collection":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/comments?post=903"}],"version-history":[{"count":9,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/903\/revisions"}],"predecessor-version":[{"id":1414,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/posts\/903\/revisions\/1414"}],"wp:attachment":[{"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/media?parent=903"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/categories?post=903"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/nextmovesoftware.com\/blog\/wp-json\/wp\/v2\/tags?post=903"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}